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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
421
ChIP-seq
7
ATAC-seq
Assay category
421
DNA binding
7
DNA accessibility
Target of assay
244
transcription factor
100
histone
100
histone modification
74
control
66
recombinant protein
60
broad histone mark
40
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
670
February, 2021
411
August, 2017
406
November, 2017
310
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
151
August, 2021
120
May, 2019
108
July, 2019
103
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
54
March, 2020
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
407
bam
347
bigWig
340
fastq
325
bed narrowPeak
318
bigBed narrowPeak
92
tagAlign
73
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
428
Homo sapiens
Biosample type
315
cell line
104
tissue
9
primary cell
Organ
315
liver
107
brain
6
epithelium
6
vasculature
4
pancreas
3
blood vessel
1
adipose tissue
1
connective tissue
1
spleen
Project
428
AMP
Genome assembly (visualization)
293
GRCh38
293
hg19
Lab
428
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
14
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
files.file_type!
hic
BIOSAMPLE
ASSAY
428 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
brain
15
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 5 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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