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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
17
WGBS
Assay category
36
DNA methylation
Date released
23
July, 2019
7
November, 2018
6
August, 2017
Available data
2502
bam
2233
bigWig
1600
tsv
919
bed narrowPeak
794
fastq
488
bigBed narrowPeak
244
bed broadPeak
241
bed bed3+
222
bigBed broadPeak
215
tagAlign
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
36
Homo sapiens
Biosample type
25
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
hic
target.investigated_as!
narrow histone mark
transcription factor
BIOSAMPLE
ASSAY
36 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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