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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
single cell RNA-seq
Assay category
29
DNA binding
3
Transcription
Target of assay
784
histone modification
783
histone
487
transcription factor
411
narrow histone mark
371
broad histone mark
100
RNA binding protein
85
recombinant protein
36
chromatin remodeller
32
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
5
December, 2017
3
August, 2017
3
July, 2019
3
May, 2021
2
September, 2017
Available data
29
bam
26
fastq
23
bigWig
9
bed bed3+
3
tsv
2
tagAlign
Organism
32
Homo sapiens
Biosample type
13
cell line
10
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
14
liver
6
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
32
AMP
Genome assembly (visualization)
32
hg19
12
GRCh38
Lab
29
AMP-T2D consortium
3
Kyle Gaulton, UCSD
files.file_type!
hic
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 2 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
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