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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
199
DNA accessibility
77
DNA binding
Target of assay
49
transcription factor
28
histone
28
histone modification
14
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
64
November, 2017
13
August, 2017
October, 2019
Available data
1359
bam
1214
bigWig
1151
bed narrowPeak
857
fastq
743
bigBed narrowPeak
349
tagAlign
112
bed broadPeak
77
bigBed broadPeak
53
bed bed3+
3
tar
Organism
77
Homo sapiens
Biosample type
58
cell line
19
primary cell
Organ
58
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
Project
77
AMP
Genome assembly (visualization)
77
hg19
62
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
files.file_type!
ibed
month_released!
October, 2019
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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