Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
16
ATAC-seq
4
ChIP-seq
Assay category
44
Transcription
16
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
188
August, 2017
157
July, 2018
104
May, 2022
98
February, 2021
96
August, 2021
92
February, 2023
72
September, 2018
64
May, 2021
57
April, 2019
55
November, 2019
53
October, 2018
40
May, 2024
39
April, 2018
39
June, 2019
31
July, 2019
26
October, 2019
23
May, 2019
21
March, 2020
19
September, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
5
March, 2019
5
October, 2017
4
February, 2020
3
August, 2018
3
October, 2022
1
August, 2022
1
June, 2018
Available data
47
bam
46
bigWig
43
tsv
3
bed narrowPeak
3
tagAlign
Organism
64
Homo sapiens
Biosample type
39
tissue
21
cell line
4
in vitro differentiated cells
Organ
61
pancreas
26
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
63
AMP
1
T1D
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
63
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
21
inconsistent ontology term
files.file_type!
ibed
BIOSAMPLE
ASSAY
64 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
cardiac fibroblast
1
Download