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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
25
DNA accessibility
19
Transcription
1
3D chromatin structure
Date released
619
February, 2021
323
August, 2017
315
May, 2021
313
May, 2020
266
August, 2021
207
June, 2019
200
May, 2022
199
February, 2023
168
July, 2018
146
October, 2019
108
July, 2019
86
May, 2019
78
December, 2017
65
October, 2018
60
November, 2017
59
September, 2020
58
September, 2018
57
April, 2019
49
April, 2018
49
March, 2020
47
September, 2023
45
November, 2019
31
February, 2018
27
November, 2018
25
February, 2020
25
May, 2024
21
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
December, 2018
7
January, 2018
5
January, 2019
5
March, 2019
4
August, 2018
3
June, 2018
3
March, 2023
3
October, 2022
1
August, 2022
Available data
44
bam
25
bed narrowPeak
19
bigWig
19
tsv
1
bedpe bed3+
1
hic
Organism
45
Homo sapiens
Biosample type
40
tissue
cell line
5
in vitro differentiated cells
Organ
39
pancreas
1
adipose tissue
1
connective tissue
Project
45
AMP
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
ibed
target.investigated_as!
narrow histone mark
biosample_type!
cell line
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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