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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
52
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
52
DNA binding
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
12
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
23
April, 2019
21
October, 2019
5
May, 2019
3
June, 2019
Available data
52
bam
39
bed narrowPeak
39
bigWig
24
bigBed narrowPeak
Organism
52
Homo sapiens
Biosample type
27
tissue
15
primary cell
10
cell line
Organ
466
liver
199
pancreas
131
connective tissue
122
epithelium
100
brain
96
vasculature
93
blood vessel
88
heart
66
limb
65
adipose tissue
60
blood
60
bodily fluid
52
kidney
35
nerve
28
artery
24
musculature of body
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
Project
52
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
52
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
tissue
kidney
27
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
cell line
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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