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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
total RNA-seq
13
ATAC-seq
1
ChIP-seq
Assay category
173
Transcription
13
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
563
February, 2021
232
August, 2017
226
November, 2017
210
June, 2019
188
May, 2020
187
May, 2021
167
October, 2019
164
July, 2018
96
May, 2019
89
August, 2021
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
12
May, 2023
8
October, 2017
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
276
bam
263
bigWig
173
tsv
103
bed narrowPeak
tagAlign
Organism
187
Homo sapiens
Biosample type
79
in vitro differentiated cells
65
primary cell
38
tissue
5
cell line
Organ
41
pancreas
7
epithelium
3
heart
2
embryo
1
connective tissue
Project
135
AMP
52
T1D
Genome assembly (visualization)
227
hg19
187
GRCh38
Lab
136
AMP-T2D consortium
51
Kyle Gaulton, UCSD
Audit category:
70
inconsistent ontology term
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
187 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 8 more…
primary cell
monocyte
51
13
embryonic stem cell
1
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
1
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