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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
4
DNase-seq
2
ChIP-seq
Assay category
31
DNA accessibility
2
DNA binding
Target of assay
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
27
February, 2023
6
June, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
33
Homo sapiens
Biosample type
30
tissue
3
primary cell
Organ
390
liver
187
heart
183
kidney
167
pancreas
129
vasculature
125
blood vessel
125
epithelium
120
brain
92
limb
74
connective tissue
70
artery
54
blood
54
bodily fluid
47
musculature of body
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
vein
12
adipose tissue
8
bone element
8
skeleton
Project
33
AMP
Genome assembly (visualization)
33
hg19
6
GRCh38
Lab
33
AMP-T2D consortium
files.file_type!
tagAlign
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
33 results
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ATAC-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
2
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