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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
Assay category
12
DNA binding
Target of assay
11
transcription factor
6
chromatin remodeller
2
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
Date released
10
November, 2017
2
November, 2018
Available data
89
fastq
88
bam
86
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
tagAlign
2
bed broadPeak
Organism
12
Homo sapiens
Biosample type
12
cell line
Organ
12
liver
Project
12
AMP
Genome assembly (visualization)
12
hg19
5
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
tagAlign
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
cell line
HepG2
12
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