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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
100
ATAC-seq
1
pCHi-C
Assay category
100
DNA accessibility
Date released
328
November, 2017
237
August, 2017
235
October, 2019
218
June, 2019
174
May, 2022
162
February, 2021
142
August, 2021
127
May, 2021
120
May, 2019
112
February, 2023
101
May, 2020
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
19
April, 2020
16
January, 2021
12
November, 2020
11
September, 2017
9
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
95
bam
72
bigWig
tagAlign
27
bed narrowPeak
1
tsv
Organism
101
Homo sapiens
Biosample type
100
primary cell
1
cell line
Organ
1
liver
Project
101
AMP
Genome assembly (visualization)
45
hg19
Lab
101
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
tagAlign
lab.title!
Katalin Susztak, Upenn
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
101 results
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Clear Filters
ATAC-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
cell line
HepG2
1
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