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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
14
ChIP-seq
12
ATAC-seq
2
Capture-C
2
Hi-C
Assay category
15
Transcription
14
DNA binding
12
DNA accessibility
2
3D chromatin structure
Target of assay
11
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
569
February, 2021
263
November, 2017
238
August, 2017
233
May, 2020
227
May, 2021
187
June, 2019
177
October, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
59
November, 2019
49
April, 2018
47
October, 2018
45
August, 2021
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
7
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
46
bigWig
41
bed narrowPeak
40
bam
tagAlign
15
tsv
5
bed bed3+
2
hic
1
bedpe bed3+
Organism
45
Homo sapiens
Biosample type
23
cell line
21
in vitro differentiated cells
1
tissue
Organ
15
liver
8
embryo
4
connective tissue
1
kidney
Project
45
AMP
Genome assembly (visualization)
89
GRCh38
45
hg19
Lab
25
AMP-T2D consortium
15
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
Capture-C
Hi-C
cell line
HepG2
14
1
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
10
adipocyte
1
1
osteoblast
1
1
tissue
kidney
1
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