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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
WGBS
13
RRBS
Assay category
28
DNA methylation
Date released
17
July, 2019
6
August, 2017
5
November, 2018
Available data
3051
bam
2852
bigWig
1652
bed narrowPeak
1443
tsv
1077
fastq
953
bigBed narrowPeak
tagAlign
299
bed broadPeak
262
bigBed broadPeak
251
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
23
tissue
4
primary cell
1
cell line
Organ
8
heart
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tagAlign
organ_slims!
epithelium
spleen
BIOSAMPLE
ASSAY
28 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
cell line
HepG2
1
See all biosamples
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