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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
21
total RNA-seq
13
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
21
Transcription
13
DNA binding
2
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
699
February, 2021
328
November, 2017
326
August, 2017
309
May, 2021
291
May, 2020
235
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
165
August, 2021
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
9
October, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
59
bam
37
bed narrowPeak
31
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
62
Homo sapiens
Biosample type
41
tissue
16
cell line
5
in vitro differentiated cells
Organ
55
pancreas
16
epithelium
kidney
2
adipose tissue
2
connective tissue
Project
62
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
files.file_type!
tagAlign
organ_slims!
kidney
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
13
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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