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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
Assay category
31
DNA binding
Target of assay
29
transcription factor
6
chromatin remodeller
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
1
recombinant protein
Date released
17
August, 2017
10
November, 2017
3
November, 2018
1
December, 2017
Available data
35
fastq
34
bam
32
bigWig
15
bed narrowPeak
15
bigBed narrowPeak
4
bed bed3+
tagAlign
2
bed broadPeak
Organism
31
Homo sapiens
Biosample type
13
cell line
12
tissue
6
in vitro differentiated cells
Organ
pancreas
21
epithelium
17
connective tissue
13
liver
12
adipose tissue
1
embryo
Project
31
AMP
Genome assembly (visualization)
29
hg19
22
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
31
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
tagAlign
organ_slims!
pancreas
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
cell line
HepG2
13
tissue
white adipose tissue
12
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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