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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
10
DNA binding
3
DNA accessibility
Target of assay
4
control
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
2
November, 2018
2
October, 2017
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
13
Homo sapiens
Biosample type
9
primary cell
4
tissue
Organ
464
pancreas
453
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
13
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
13
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
13
AMP-T2D consortium
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
brain
1
2
cerebellum (Hemisphere)
1
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