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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
Assay category
166
Transcription
88
DNA binding
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
18
control
8
transcription factor
6
RNA binding protein
Date released
57
April, 2019
21
May, 2019
5
June, 2019
5
October, 2019
Available data
93
bam
74
bed narrowPeak
74
bigWig
64
bigBed narrowPeak
tagAlign
Organism
88
Homo sapiens
Biosample type
83
tissue
5
primary cell
Organ
466
liver
199
pancreas
131
connective tissue
122
epithelium
100
brain
96
vasculature
93
blood vessel
88
heart
66
limb
65
adipose tissue
60
blood
60
bodily fluid
52
kidney
35
nerve
28
artery
24
musculature of body
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
Project
88
AMP
Genome assembly (visualization)
70
hg19
69
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
88 results
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ChIP-seq
tissue
heart left ventricle
35
heart
14
heart right ventricle
13
right atrium auricular region
10
right cardiac atrium
6
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primary cell
cardiac fibroblast
5
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