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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
Assay category
DNA accessibility
28
DNA binding
4
Transcription
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
23
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
Available data
28
bam
21
bed narrowPeak
21
bigBed narrowPeak
21
bigWig
4
tsv
Organism
32
Homo sapiens
Biosample type
58
cell line
32
tissue
2
primary cell
Organ
539
connective tissue
480
adipose tissue
423
pancreas
336
liver
247
heart
232
brain
149
kidney
146
bone element
90
blood vessel
90
vasculature
78
limb
48
musculature of body
40
nerve
32
artery
25
eye
23
spleen
10
lung
5
gonad
5
ovary
4
skeleton
3
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
32
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
Lab
32
AMP-T2D consortium
files.file_type!
tagAlign bed3+
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
tissue
tibial artery
23
1
coronary artery
5
1
pulmonary artery
2
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