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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
78
DNA binding
Target of assay
153
histone
153
histone modification
78
broad histone mark
75
narrow histone mark
35
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
22
May, 2021
17
September, 2018
16
August, 2017
12
October, 2019
8
June, 2019
2
May, 2019
1
August, 2021
Available data
74
bigWig
68
bed narrowPeak
56
bam
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
7
tagAlign
1
bed bed3+
Organism
78
Homo sapiens
Biosample type
303
tissue
78
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
31
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
1
liver
Project
78
AMP
44
T1D
Genome assembly (visualization)
74
hg19
52
GRCh38
Lab
58
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
primary cell
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
skeletal muscle myoblast
6
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