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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
6
single cell RNA-seq
4
Hi-C
3
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
35
DNA accessibility
9
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
35
February, 2023
6
August, 2021
3
February, 2020
3
July, 2019
3
March, 2020
October, 2019
Available data
bam
119
bigWig
99
bed narrowPeak
68
tsv
50
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
2
hic
Organism
50
Homo sapiens
Biosample type
46
tissue
4
primary cell
Organ
253
pancreas
208
kidney
204
epithelium
181
heart
110
liver
93
bone element
87
connective tissue
50
vasculature
49
blood vessel
48
adipose tissue
40
brain
39
artery
39
musculature of body
33
eye
20
lung
9
blood
9
bodily fluid
8
skeleton
7
limb
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
1
vein
Project
50
AMP
Genome assembly (visualization)
35
GRCh38
5
hg19
Lab
50
AMP-T2D consortium
files.file_type!
tagAlign bed3+
bam
month_released!
October, 2019
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
total RNA-seq
RRBS
pCHi-C
tissue
coronary artery
35
1
aorta
4
1
1
pulmonary artery
2
ascending aorta
1
tibial artery
1
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
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