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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
47
transcription factor
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
64
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
64
Homo sapiens
Biosample type
58
cell line
6
primary cell
Organ
58
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
Project
64
AMP
Genome assembly (visualization)
64
hg19
50
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
13
inconsistent control read length
files.file_type!
tagAlign bed3+
hdf5
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
cell line
HepG2
58
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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