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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
4
WGBS
2
RRBS
Assay category
7
3D chromatin structure
6
DNA methylation
Date released
4
November, 2018
3
October, 2022
2
July, 2019
2
November, 2019
1
August, 2021
1
March, 2020
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
13
Homo sapiens
Biosample type
9
tissue
3
primary cell
1
cell line
Organ
13
pancreas
11
epithelium
11
heart
6
musculature of body
5
liver
4
connective tissue
4
kidney
4
vasculature
3
adipose tissue
3
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
10
AMP
3
HPAP
Genome assembly (visualization)
8
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
1
inconsistent ontology term
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
13 results
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Clear Filters
Hi-C
WGBS
RRBS
tissue
pancreas
1
2
1
islet of Langerhans
2
1
body of pancreas
2
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
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