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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
170
ChIP-seq
100
ATAC-seq
1
pCHi-C
Assay category
190
Transcription
170
DNA binding
100
DNA accessibility
Target of assay
119
histone
119
histone modification
61
narrow histone mark
58
broad histone mark
46
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
313
October, 2019
218
June, 2019
205
February, 2023
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
403
bam
357
bigWig
189
tsv
124
bed narrowPeak
97
bigBed narrowPeak
50
tagAlign
Organism
461
Homo sapiens
Biosample type
308
tissue
152
primary cell
1
cell line
Organ
194
liver
50
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
2
pancreas
Project
416
AMP
45
T1D
Genome assembly (visualization)
357
hg19
303
GRCh38
Lab
416
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
11
inconsistent ontology term
files.file_type!
tagAlign bed3+
month_released!
May, 2022
BIOSAMPLE
ASSAY
461 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
liver
143
50
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 7 more…
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
kidney epithelial cell
5
B cell
2
2
+ See 25 more…
cell line
HepG2
1
See all biosamples
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