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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
9
ChIP-seq
2
single cell RNA-seq
Assay category
57
Transcription
9
DNA binding
Target of assay
9
control
Date released
54
February, 2021
5
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
July, 2019
Available data
101
bam
84
bigWig
bed narrowPeak
57
tsv
25
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
66
Homo sapiens
Biosample type
54
cell line
11
tissue
1
primary cell
Organ
732
pancreas
609
connective tissue
478
adipose tissue
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
66
AMP-T2D consortium
files.file_type!
tagAlign bed3+
bed narrowPeak
organ_slims!
epithelium
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
5
coronary artery
1
2
pulmonary artery
2
primary cell
smooth muscle cell of the coronary artery
1
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