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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
1
ATAC-seq
1
RRBS
1
total RNA-seq
Assay category
9
DNA accessibility
1
DNA methylation
1
Transcription
Date released
8
January, 2021
2
July, 2019
1
January, 2018
Available data
61
bam
fastq
56
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
11
Homo sapiens
Biosample type
9
primary cell
1
cell line
1
tissue
Organ
583
connective tissue
475
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
267
epithelium
264
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
T1D
3
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
8
Kyle Gaulton, UCSD
3
AMP-T2D consortium
files.file_type!
tagAlign bed3+
fastq
BIOSAMPLE
ASSAY
11 results
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snATAC-seq
ATAC-seq
RRBS
total RNA-seq
primary cell
peripheral blood mononuclear cell
8
pericardium fibroblast
1
cell line
GM12878
1
tissue
pericardium
1
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