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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1391
total RNA-seq
768
ChIP-seq
489
ATAC-seq
367
single cell RNA-seq
211
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
52
pCHi-C
30
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
GRO-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
1
February, 2023
Biosample type
1
cell line
Organ
1
epithelium
1
pancreas
Project
1
AMP
Lab
1
AMP-T2D consortium
files.file_type!
tagAlign bed3+
target.investigated_as!
histone modification
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
1 results
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CRISPR genome editing followed by sgRNA sequencing
cell line
EndoC_BH1
1