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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
WGBS
21
RRBS
1
DNAme array
Assay category
1850
Transcription
1699
DNA binding
766
DNA accessibility
88
DNA methylation
29
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
25
July, 2019
15
August, 2017
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
28
bed bedMethyl
28
bigBed bedMethyl
14
fastq
9
bam
9
bigWig
6
tsv
Organism
88
Homo sapiens
Biosample type
58
primary cell
30
tissue
Organ
53
epithelium
49
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
47
HPAP
41
AMP
Genome assembly (visualization)
19
hg19
9
GRCh38
Lab
47
Klaus Kaestner, Upenn
41
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
tar
organ_slims!
blood vessel
month_released!
November, 2018
BIOSAMPLE
ASSAY
88 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 10 more…
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