Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1715
ChIP-seq
1053
total RNA-seq
506
ATAC-seq
365
single cell RNA-seq
203
DNase-seq
86
RNA microarray
84
snATAC-seq
69
WGBS
52
pCHi-C
33
Hi-C
20
RRBS
15
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
15
Transcription
Date released
15
July, 2019
5
January, 2018
Available data
20
bigWig
15
bam
15
tsv
5
fastq
Organism
20
Homo sapiens
Biosample type
14
tissue
4
in vitro differentiated cells
1
primary cell
1
stem cell
Organ
4
brain
3
adipose tissue
connective tissue
3
liver
2
musculature of body
2
pancreas
1
embryo
1
heart
1
kidney
Project
20
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
5
hg18
Lab
20
AMP-T2D consortium
files.file_type!
tar
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
GRO-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 7 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
skeletal muscle satellite cell
1
stem cell
hESC
1
See all biosamples
Download