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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
8
ATAC-seq
Assay category
132
DNA binding
8
DNA accessibility
Target of assay
103
histone
103
histone modification
68
broad histone mark
35
narrow histone mark
25
control
4
RNA binding protein
4
transcription factor
Date released
587
February, 2021
411
August, 2017
403
November, 2017
333
May, 2020
316
August, 2021
309
May, 2021
290
October, 2019
200
May, 2022
194
February, 2023
192
June, 2019
162
July, 2018
117
May, 2019
106
July, 2019
90
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
49
April, 2018
47
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
39
November, 2019
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
November, 2020
8
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
132
bam
109
bigWig
107
bed narrowPeak
101
bigBed narrowPeak
17
fastq
14
tagAlign
4
bed broadPeak
Organism
140
Homo sapiens
Biosample type
138
tissue
2
primary cell
Organ
50
blood vessel
50
vasculature
44
brain
21
heart
7
limb
7
musculature of body
7
pancreas
5
artery
2
epithelium
2
kidney
1
adipose tissue
1
connective tissue
1
spleen
Project
140
AMP
Genome assembly (visualization)
108
GRCh38
108
hg19
Lab
139
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
inconsistent ontology term
Audit category:
4
missing controlled_by
files.file_type!
tar
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
140 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
ascending aorta
16
thoracic aorta
16
brain
15
temporal lobe
15
angular gyrus
13
+ See 11 more…
primary cell
kidney epithelial cell
2
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