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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
234
histone
234
histone modification
122
broad histone mark
112
narrow histone mark
29
control
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
8
June, 2019
3
May, 2021
3
October, 2019
1
August, 2021
1
May, 2019
Available data
26
bam
13
fastq
4
bigWig
2
tagAlign
Organism
29
Homo sapiens
Biosample type
162
tissue
83
cell line
37
in vitro differentiated cells
29
primary cell
1
stem cell
Organ
21
epithelium
12
pancreas
brain
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
1
eye
1
liver
Project
29
AMP
Genome assembly (visualization)
4
hg19
Lab
26
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
files.file_type!
tar
organ_slims!
brain
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
endothelial cell of umbilical vein
2
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