Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
48
single cell RNA-seq
30
ChIP-seq
Assay category
164
Transcription
30
DNA binding
Target of assay
28
transcription factor
2
RNA binding protein
2
chromatin remodeller
Date released
551
February, 2021
331
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
206
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
198
bam
194
bigWig
164
tsv
85
fastq
30
bed narrowPeak
30
bigBed narrowPeak
Organism
194
Homo sapiens
Biosample type
119
tissue
48
primary cell
27
cell line
Organ
153
pancreas
33
epithelium
27
blood
27
bodily fluid
3
spleen
2
connective tissue
Project
194
AMP
Genome assembly (visualization)
194
GRCh38
194
hg19
Lab
194
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
inconsistent control
files.file_type!
tar
BIOSAMPLE
ASSAY
194 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
116
spleen
3
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
GM12878
27
See all biosamples
Download