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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
48
single cell RNA-seq
8
ATAC-seq
6
ChIP-seq
Assay category
164
Transcription
8
DNA accessibility
6
DNA binding
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
551
February, 2021
331
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
206
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
179
bam
178
bigWig
164
tsv
67
fastq
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
178
Homo sapiens
Biosample type
130
tissue
48
primary cell
Organ
158
pancreas
33
epithelium
7
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
178
AMP
Genome assembly (visualization)
178
GRCh38
177
hg19
Lab
177
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
3
missing controlled_by
files.file_type!
tar
BIOSAMPLE
ASSAY
178 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
116
1
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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