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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
48
snATAC-seq
47
WGBS
ATAC-seq
45
single cell RNA-seq
3
Hi-C
Assay category
121
Transcription
48
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
95
May, 2022
76
February, 2023
September, 2020
45
February, 2021
3
October, 2022
Available data
121
fastq
95
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
219
Homo sapiens
Biosample type
219
primary cell
Organ
87
epithelium
87
pancreas
Project
3817
AMP
233
T1D
219
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
219
Klaus Kaestner, Upenn
Audit category:
30
audit script error
files.file_type!
tar
month_released!
September, 2020
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
219 results
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total RNA-seq
snATAC-seq
WGBS
single cell RNA-seq
Hi-C
primary cell
Langerhans cell
48
45
pancreatic alpha cell
27
31
1
exocrine cell
39
pancreatic beta cell
10
16
1
pancreatic acinar cell
1
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