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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ATAC-seq
56
ChIP-seq
1
pCHi-C
Assay category
Transcription
105
DNA accessibility
56
DNA binding
Target of assay
29
control
27
histone
27
histone modification
27
narrow histone mark
Date released
403
November, 2017
322
August, 2017
283
October, 2019
218
June, 2019
217
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
49
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
106
bam
77
bigWig
50
tagAlign
32
bed narrowPeak
11
fastq
5
bigBed narrowPeak
2
bed bed3+
1
tsv
Organism
162
Homo sapiens
Biosample type
105
primary cell
56
tissue
1
cell line
Organ
51
liver
11
pancreas
5
epithelium
Project
162
AMP
Genome assembly (visualization)
79
hg19
26
GRCh38
Lab
162
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
tar
assay_slims!
Transcription
BIOSAMPLE
ASSAY
162 results
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ATAC-seq
ChIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 26 more…
tissue
liver
50
islet of Langerhans
6
cell line
HepG2
1
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