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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ATAC-seq
23
ChIP-seq
12
WGBS
4
Hi-C
2
total RNA-seq
1
pCHi-C
Assay category
56
DNA accessibility
23
DNA binding
12
DNA methylation
4
3D chromatin structure
2
Transcription
Target of assay
23
control
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
40
May, 2024
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
33
bam
23
tagAlign
9
bigWig
8
bed bedMethyl
8
bigBed bedMethyl
1
tsv
Organism
98
Homo sapiens
Biosample type
57
primary cell
40
tissue
1
cell line
Organ
25
liver
8
heart
5
limb
5
musculature of body
2
blood vessel
2
vasculature
1
brain
Project
98
AMP
Genome assembly (visualization)
hg19
286
GRCh38
Lab
98
AMP-T2D consortium
files.file_type!
tar
assembly!
hg19
BIOSAMPLE
ASSAY
98 results
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ATAC-seq
ChIP-seq
WGBS
Hi-C
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
neutrophil
1
tissue
liver
23
gastrocnemius medialis
4
heart left ventricle
4
aorta
2
heart right ventricle
2
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cell line
HepG2
1
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