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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
3
DNase-seq
Assay category
49
DNA binding
3
DNA accessibility
Target of assay
49
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
Date released
312
November, 2017
194
May, 2020
63
December, 2017
53
August, 2017
52
November, 2018
40
May, 2022
35
August, 2021
9
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
53
bam
53
fastq
52
bigWig
51
bed narrowPeak
51
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
45
cell line
7
tissue
Organ
52
liver
15
blood
15
bodily fluid
7
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
52
AMP
Genome assembly (visualization)
51
GRCh38
49
hg19
Lab
52
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
tar
bigBed bedMethyl
BIOSAMPLE
ASSAY
52 results
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ChIP-seq
DNase-seq
cell line
HepG2
45
tissue
liver
4
2
right lobe of liver
1
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