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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
snATAC-seq
4
Hi-C
Assay category
29
DNA accessibility
4
3D chromatin structure
Date released
27
February, 2021
3
October, 2022
1
August, 2022
1
May, 2022
1
October, 2019
Available data
27
fastq
tsv
6
txt
5
csv
4
hic
3
bedpe bed3+
3
cool
1
bed bed3+
Organism
33
Homo sapiens
Biosample type
31
primary cell
2
tissue
Organ
4
epithelium
4
pancreas
1
blood vessel
1
musculature of body
1
vasculature
1
vein
Project
30
HPAP
3
AMP
Genome assembly (visualization)
5
hg19
Lab
30
Klaus Kaestner, Upenn
3
AMP-T2D consortium
Audit category:
168
inconsistent ontology term
33
audit script error
25
inconsistent control
files.file_type!
tsv
assay_title!
ATAC-seq
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
33 results
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snATAC-seq
Hi-C
primary cell
Langerhans cell
27
endothelial cell of umbilical vein
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
skeletal muscle tissue
1
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