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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
34
ATAC-seq
17
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
34
DNA accessibility
9
Transcription
1
DNA methylation
Date released
200
May, 2022
189
February, 2023
187
June, 2019
153
August, 2021
148
February, 2021
102
May, 2020
61
May, 2021
59
September, 2020
56
October, 2019
47
September, 2023
43
July, 2019
28
November, 2019
26
August, 2017
19
April, 2020
18
November, 2018
16
January, 2021
16
March, 2020
15
May, 2023
15
September, 2018
12
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2018
1
December, 2019
Available data
186
bam
180
bigWig
tsv
13
bed narrowPeak
2
bed bed3+
Organism
61
Homo sapiens
Biosample type
33
primary cell
16
cell line
10
in vitro differentiated cells
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
44
AMP
17
T1D
Genome assembly (visualization)
20
hg19
13
GRCh38
Lab
31
AMP-T2D consortium
30
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
files.file_type!
tsv
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
monocyte
13
1
1
1
CD8-positive, alpha-beta T cell
1
2
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
5
tissue
pancreas
1
thymus
1
See all biosamples
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