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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
18
ATAC-seq
17
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
18
DNA accessibility
9
Transcription
1
DNA methylation
Date released
200
May, 2022
187
June, 2019
183
February, 2023
144
August, 2021
138
February, 2021
102
May, 2020
59
September, 2020
53
October, 2019
47
September, 2023
45
May, 2021
43
July, 2019
26
August, 2017
26
November, 2019
19
April, 2020
17
November, 2018
16
January, 2021
15
March, 2020
15
May, 2023
15
September, 2018
8
October, 2017
7
August, 2020
7
January, 2018
6
November, 2020
5
March, 2019
5
September, 2017
4
July, 2018
3
March, 2023
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
182
bam
176
bigWig
tsv
13
bed narrowPeak
2
bed bed3+
Organism
45
Homo sapiens
Biosample type
33
primary cell
cell line
10
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
28
AMP
17
T1D
Genome assembly (visualization)
20
hg19
13
GRCh38
Lab
30
Kyle Gaulton, UCSD
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
assay_title!
ChIP-seq
biosample_type!
cell line
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
monocyte
13
1
1
1
CD8-positive, alpha-beta T cell
1
2
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
5
5
tissue
pancreas
1
thymus
1
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