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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
20
ChIP-seq
8
WGBS
3
DNase-seq
1
single cell RNA-seq
Assay category
38
DNA accessibility
20
DNA binding
8
DNA methylation
1
Transcription
Target of assay
20
control
Date released
36
February, 2023
10
April, 2019
8
July, 2019
6
May, 2019
5
June, 2019
2
February, 2021
Available data
tsv
38
bed narrowPeak
29
bam
9
bigWig
6
bed bedMethyl
6
bigBed bedMethyl
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
2
tagAlign
Organism
67
Homo sapiens
Biosample type
62
tissue
3
primary cell
2
cell line
Organ
279
pancreas
213
kidney
204
epithelium
154
liver
108
brain
91
connective tissue
89
bone element
67
heart
62
adipose tissue
61
blood vessel
61
vasculature
44
artery
23
limb
22
eye
20
musculature of body
19
lung
14
blood
14
bodily fluid
11
nerve
10
spleen
8
embryo
5
vein
4
gonad
4
ovary
4
skeleton
1
bone marrow
1
lymph node
1
pituitary gland
1
skin of body
1
thymus
Project
67
AMP
Genome assembly (visualization)
156
GRCh38
hg19
Lab
67
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
assembly!
hg19
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
ChIP-seq
WGBS
DNase-seq
single cell RNA-seq
tissue
coronary artery
35
2
heart left ventricle
6
4
heart
2
1
2
1
heart right ventricle
2
2
right atrium auricular region
3
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primary cell
cardiac fibroblast
2
1
cell line
smooth muscle cell of the coronary artery
2
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