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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
ATAC-seq
4
Hi-C
2
FAIRE-seq
Assay category
15
DNA methylation
4
3D chromatin structure
2
DNA accessibility
Date released
281
November, 2017
192
October, 2019
187
June, 2019
182
August, 2017
125
May, 2021
97
May, 2019
77
December, 2017
71
November, 2018
65
April, 2019
45
October, 2018
33
August, 2021
32
September, 2018
30
December, 2018
27
May, 2020
21
January, 2019
21
July, 2019
16
February, 2018
15
March, 2020
13
November, 2019
7
February, 2021
6
October, 2017
3
October, 2022
2
September, 2017
1
March, 2019
1
May, 2022
1
May, 2023
1
November, 2020
Available data
71
bigWig
67
bam
tsv
15
bed bedMethyl
15
bigBed bedMethyl
4
bed bed3+
4
hdf5
2
bed narrowPeak
2
bigBed narrowPeak
Organism
21
Homo sapiens
Biosample type
13
primary cell
8
tissue
Organ
8
epithelium
6
brain
5
kidney
3
vasculature
2
blood vessel
2
connective tissue
2
heart
2
liver
2
pancreas
1
eye
1
musculature of body
1
pericardium
Project
21
AMP
Genome assembly (visualization)
21
hg19
8
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
tsv
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
21 results
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Clear Filters
RRBS
Hi-C
FAIRE-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
tissue
kidney
1
1
brain
1
frontal cortex
1
heart left ventricle
1
islet of Langerhans
1
+ See 2 more…
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