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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
45
ATAC-seq
Assay category
77
DNA binding
45
DNA accessibility
Target of assay
42
transcription factor
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
281
November, 2017
201
October, 2019
187
August, 2017
187
June, 2019
143
May, 2021
97
May, 2019
77
December, 2017
72
May, 2020
71
November, 2018
65
April, 2019
46
September, 2018
45
August, 2021
45
February, 2023
45
October, 2018
39
May, 2022
39
November, 2019
30
December, 2018
29
February, 2021
26
July, 2019
21
January, 2019
17
March, 2020
16
February, 2018
13
October, 2017
7
September, 2017
3
January, 2018
3
March, 2019
3
October, 2022
2
November, 2020
1
May, 2023
Available data
102
bed narrowPeak
77
bam
77
fastq
75
bigWig
50
bigBed narrowPeak
19
bed bed3+
10
bed bed3
3
bed bedgraph
3
txt
Organism
122
Homo sapiens
Biosample type
69
tissue
50
in vitro differentiated cells
3
stem cell
Organ
50
liver
28
epithelium
27
eye
10
connective tissue
9
embryo
4
bone element
4
skeleton
1
adipose tissue
1
brain
Project
122
AMP
Genome assembly (visualization)
122
hg19
112
GRCh38
Lab
119
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
27
inconsistent control
5
inconsistent ontology term
Audit category:
11
inconsistent control read length
files.file_type!
tsv
BIOSAMPLE
ASSAY
122 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
29
retina
15
pigmented layer of retina
12
right lobe of liver
7
acetabular part of hip bone
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
chondrocyte
5
definitive endodermal cell
5
+ See 8 more…
stem cell
hESC
3
See all biosamples
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