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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
Assay category
10
3D chromatin structure
3
DNA binding
2
DNA accessibility
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
281
November, 2017
201
October, 2019
187
August, 2017
187
June, 2019
143
May, 2021
97
May, 2019
77
December, 2017
72
May, 2020
71
November, 2018
65
April, 2019
46
September, 2018
45
August, 2021
45
February, 2023
45
October, 2018
39
May, 2022
39
November, 2019
30
December, 2018
29
February, 2021
26
July, 2019
21
January, 2019
17
March, 2020
16
February, 2018
13
October, 2017
7
September, 2017
3
January, 2018
3
March, 2019
3
October, 2022
2
November, 2020
1
May, 2023
Available data
20
bigWig
16
bam
tsv
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
17
Homo sapiens
Biosample type
10
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
6
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
3
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
17 results
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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
2
1
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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