Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
4
DNase-seq
Assay category
48
DNA binding
4
DNA accessibility
Target of assay
31
transcription factor
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
3
RNA binding protein
3
chromatin remodeller
Date released
27
December, 2017
22
June, 2019
2
May, 2019
1
December, 2018
Available data
240
bam
220
bigWig
tsv
91
bed narrowPeak
85
txt
52
bigBed narrowPeak
39
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
52
Homo sapiens
Biosample type
28
tissue
23
primary cell
1
cell line
Organ
27
liver
10
connective tissue
8
musculature of body
5
epithelium
5
kidney
4
heart
1
blood
1
bodily fluid
1
limb
1
vasculature
Project
52
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
52
AMP-T2D consortium
Audit category:
28
inconsistent control
24
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
52 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
tissue
liver
27
muscle of leg
1
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
kidney epithelial cell
2
+ See 1 more…
cell line
GM12878
1
See all biosamples
Download