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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
34
ATAC-seq
9
total RNA-seq
1
DNAme array
Assay category
80
DNA binding
34
DNA accessibility
9
Transcription
1
DNA methylation
Target of assay
55
histone
55
histone modification
32
broad histone mark
23
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
200
May, 2022
196
August, 2021
166
February, 2023
156
February, 2021
152
May, 2020
124
May, 2021
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
15
May, 2023
14
March, 2020
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
167
bigWig
141
bam
tsv
48
bed narrowPeak
6
tagAlign
2
bed bed3+
Organism
124
Homo sapiens
Biosample type
54
primary cell
53
in vitro differentiated cells
16
cell line
1
tissue
Organ
20
pancreas
19
epithelium
Project
124
AMP
T1D
Genome assembly (visualization)
58
hg19
18
GRCh38
Lab
83
Kyle Gaulton, UCSD
41
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
files.file_type!
tsv
award.project!
T1D
BIOSAMPLE
ASSAY
124 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
2
monocyte
1
13
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
neutrophil
1
in vitro differentiated cells
embryonic stem cell
37
5
5
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
16
tissue
pancreas
1
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