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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
7
June, 2019
7
October, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
42
Homo sapiens
Biosample type
37
tissue
5
primary cell
Organ
400
pancreas
271
epithelium
260
brain
210
heart
210
liver
209
kidney
201
connective tissue
154
vasculature
148
blood vessel
115
limb
97
bone element
89
adipose tissue
86
musculature of body
69
artery
42
eye
38
nerve
24
spleen
23
embryo
22
vein
18
ureter
12
skeleton
10
lung
8
blood
8
bodily fluid
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
42
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
42
AMP-T2D consortium
files.file_type!
tsv
biosample_type!
cell line
assay_slims!
Transcription
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
3
1
1
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