Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
7
total RNA-seq
Assay category
86
DNA binding
29
DNA accessibility
7
Transcription
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
Date released
101
May, 2021
18
February, 2023
16
January, 2021
4
March, 2020
Available data
182
bam
182
bigWig
tsv
86
bed narrowPeak
84
tagAlign
Organism
139
Homo sapiens
Biosample type
108
primary cell
31
tissue
cell line
Organ
30
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
2262
AMP
318
HPAP
139
T1D
47
KPMP
19
LungMap
2
community
1
ITG
Genome assembly (visualization)
86
GRCh38
86
hg19
Lab
135
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
biosample_type!
cell line
BIOSAMPLE
ASSAY
139 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
pCHi-C
ATAC-seq
total RNA-seq
primary cell
monocyte
84
1
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
+ See 11 more…
tissue
islet of Langerhans
2
6
11
7
pancreas
4
thymus
1
See all biosamples
Download