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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
16
pCHi-C
13
ATAC-seq
3
total RNA-seq
1
DNAme array
Assay category
121
DNA binding
13
DNA accessibility
3
Transcription
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
154
May, 2021
134
May, 2022
102
May, 2020
76
February, 2023
59
August, 2017
59
September, 2020
55
June, 2019
47
September, 2018
41
February, 2021
32
October, 2019
13
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
May, 2019
5
September, 2017
4
August, 2021
3
October, 2022
2
November, 2020
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
149
bam
127
bed narrowPeak
84
tagAlign
tsv
2
bed bed3+
Organism
154
Homo sapiens
Biosample type
154
primary cell
53
in vitro differentiated cells
17
cell line
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
100
T1D
54
AMP
Genome assembly (visualization)
132
hg19
97
GRCh38
Lab
135
Kyle Gaulton, UCSD
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
bed bedgraph
BIOSAMPLE
ASSAY
154 results
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ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
primary cell
monocyte
85
1
13
1
1
CD8-positive, alpha-beta T cell
33
1
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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