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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1871
ChIP-seq
478
ATAC-seq
212
DNase-seq
212
total RNA-seq
106
single cell RNA-seq
85
RNA microarray
63
snATAC-seq
34
Hi-C
28
WGBS
pCHi-C
21
RRBS
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
1
February, 2023
Biosample type
1
cell line
Organ
1
epithelium
1
pancreas
Project
1
AMP
Lab
1
AMP-T2D consortium
files.file_type!
tsv
zippedFastqFolder
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
1 results
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CRISPR genome editing followed by sgRNA sequencing
cell line
EndoC_BH1
1