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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
3
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
May, 2022
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
40
May, 2024
40
September, 2020
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
tsv
20
bigWig
16
bam
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
19
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
8
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
5
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tsv
zippedFastqFolder
month_released!
May, 2022
BIOSAMPLE
ASSAY
19 results
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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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